STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CE49_SOLTUIsocitrate lyase. (575 aa)    
Predicted Functional Partners:
M1B821_SOLTU
Malate synthase; Belongs to the malate synthase family.
 
 
 0.999
M1B824_SOLTU
Malate synthase; Belongs to the malate synthase family.
 
 
 0.999
M1AGW8_SOLTU
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.981
M1C0L4_SOLTU
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.981
Aconitase
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.981
M1A0A3_SOLTU
Aminotran_5 domain-containing protein.
  
 
 0.976
M1AC27_SOLTU
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.958
M1BWS8_SOLTU
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.958
M1C3I4_SOLTU
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.958
M1C3K7_SOLTU
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.958
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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