STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CEF1_SOLTUFatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (187 aa)    
Predicted Functional Partners:
M1A241_SOLTU
DAGKc domain-containing protein.
   
 0.933
M1C1B7_SOLTU
DAGKc domain-containing protein.
   
 0.933
M0ZYK0_SOLTU
Uncharacterized protein.
     
 0.924
M1AUV1_SOLTU
Uncharacterized protein.
     
 0.924
M1BAB1_SOLTU
Uncharacterized protein.
     
 0.918
M1CI64_SOLTU
Uncharacterized protein.
     
 0.918
M1C392_SOLTU
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
   
 
 0.909
M1AM39_SOLTU
Neutral ceramidase.
     
 0.900
M1A1N3_SOLTU
Uncharacterized protein.
   
 
 0.655
M0ZSD2_SOLTU
Uncharacterized protein.
   
 0.578
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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