STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CER2_SOLTUUncharacterized protein. (99 aa)    
Predicted Functional Partners:
M1AE02_SOLTU
Uncharacterized protein.
   
 0.757
M0ZTF2_SOLTU
Bac_surface_Ag domain-containing protein.
   
 0.657
M1C1E1_SOLTU
Uncharacterized protein.
   
 
 0.541
K7X8C3_SOLTU
Fiber protein Fb11.
   
  
 0.498
M1AE34_SOLTU
Uncharacterized protein.
   
  
 0.493
M1AS48_SOLTU
Uncharacterized protein.
   
  
 0.488
M1AFY1_SOLTU
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 0.477
Cr14
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inn [...]
   
  
 0.476
M0ZLR2_SOLTU
Uncharacterized protein.
      
 0.455
M1A100_SOLTU
DUF3395 domain-containing protein.
    
 0.453
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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