STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CFG2_SOLTUProtein kinase domain-containing protein. (588 aa)    
Predicted Functional Partners:
M0ZMR8_SOLTU
CSD_1 domain-containing protein.
      
 0.677
M0ZMR9_SOLTU
Uncharacterized protein.
      
 0.677
M1C4L6_SOLTU
CCHC-type domain-containing protein.
      
 0.677
M1E004_SOLTU
CSD domain-containing protein.
      
 0.677
M0ZL17_SOLTU
Uncharacterized protein.
      
 0.673
M1BCC7_SOLTU
Uncharacterized protein.
      
 0.672
M1C1T9_SOLTU
PAS domain-containing protein.
      
 0.672
M1D4M5_SOLTU
Uncharacterized protein.
   
 0.423
M1DCP1_SOLTU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
   
0.419
M1B727_SOLTU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.412
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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