STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CJU0_SOLTU60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (141 aa)    
Predicted Functional Partners:
M1BT69_SOLTU
Ribosomal_L18_c domain-containing protein.
   
 0.993
M1CL91_SOLTU
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.992
M1BIS3_SOLTU
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.983
M1BJP4_SOLTU
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
   
 0.983
M1CKD4_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 0.983
M1D4K6_SOLTU
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.983
Q307X7_SOLTU
Ribosomal protein PETRP-like; Belongs to the universal ribosomal protein uL22 family.
   
 0.983
Q3HVL2_SOLTU
Ribosomal protein L27a-like protein; Belongs to the universal ribosomal protein uL15 family.
   
 0.983
M1CKH6_SOLTU
Uncharacterized protein.
   
 
 0.981
M1A5C6_SOLTU
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.980
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.