STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CTL1_SOLTUHATPase_c domain-containing protein. (306 aa)    
Predicted Functional Partners:
SGT1
Uncharacterized protein.
   
 0.973
M1CTK8_SOLTU
Uncharacterized protein.
   
 0.973
M1CTL4_SOLTU
Uncharacterized protein.
 
     0.951
M1AMM5_SOLTU
Uncharacterized protein.
  
 0.850
M1CFF7_SOLTU
Uncharacterized protein.
  
 0.850
M1BPS5_SOLTU
ANK_REP_REGION domain-containing protein.
  
 0.838
M1BPS7_SOLTU
Uncharacterized protein.
  
 0.838
M1CMM7_SOLTU
ANK_REP_REGION domain-containing protein.
  
 0.838
M1BAZ0_SOLTU
Uncharacterized protein.
   
 0.833
M1CM57_SOLTU
CHORD domain-containing protein.
   
 
 0.801
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.