STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1DR69_SOLTURibosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (110 aa)    
Predicted Functional Partners:
M1C5C5_SOLTU
Uncharacterized protein.
   
 
 0.950
M0ZND0_SOLTU
Uncharacterized protein.
  
 0.936
M1BC62_SOLTU
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.920
M1AMN3_SOLTU
Ribosomal_TL5_C domain-containing protein.
   
 
 0.919
M1D7T8_SOLTU
Uncharacterized protein.
  
 0.915
rpl22
50S ribosomal protein L22, chloroplastic; This protein binds specifically to 23S rRNA; Belongs to the universal ribosomal protein uL22 family.
  
 0.915
M0ZVF5_SOLTU
Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
  
 0.914
M1C7B2_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
  
 0.914
M1B312_SOLTU
Uncharacterized protein.
   
 
 0.911
M1C3W8_SOLTU
Uncharacterized protein.
   
 
 0.908
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.