STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYSKP_SOLTUCysteine synthase, chloroplastic/chromoplastic. (386 aa)    
Predicted Functional Partners:
M1B5S3_SOLTU
tRNA-synt_1e domain-containing protein.
  
 
 0.860
M1AJP5_SOLTU
DALR_2 domain-containing protein.
  
 
 0.838
CgS2
Cystathionine gamma-synthase isoform 2.
 
 0.786
M1CTX3_SOLTU
Leuk-A4-hydro_C domain-containing protein.
     
 0.694
M1ANJ7_SOLTU
Uncharacterized protein.
  
 
 0.669
M1AEW6_SOLTU
Uncharacterized protein.
  
 
 0.656
NIR
Uncharacterized protein.
  
 
 0.656
M0ZNW5_SOLTU
Uncharacterized protein.
  
 0.633
M1A5A4_SOLTU
Uncharacterized protein.
  
 0.633
M1AWG6_SOLTU
Uncharacterized protein.
  
 0.633
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.