STRINGSTRING
102578163 protein (Solanum tuberosum) - STRING interaction network
"102578163" - Nucleic acid binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
102578163Nucleic acid binding protein (274 aa)    
Predicted Functional Partners:
102588100
Uncharacterized protein; Transcription factor VSF-1 (444 aa)
           
  0.725
102578627
BZIP protein (306 aa)
       
 
  0.724
PGSC0003DMT400048247
Zinc finger protein (155 aa)
           
  0.589
102595383
Uncharacterized protein; Homocysteine s-methyltransferase (338 aa)
           
  0.572
PGSC0003DMT400020589
Uncharacterized protein; ABA 8’-hydroxylase CYP707A2; Belongs to the cytochrome P450 family (475 aa)
           
  0.572
102598221
DNA binding protein (577 aa)
           
  0.572
102600546
Uncharacterized protein; RAB5B (200 aa)
           
  0.554
102595777
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (564 aa)
           
  0.485
PGSC0003DMT400011979
Uncharacterized protein; Calmodulin-binding transcription activator (Camta), plants (702 aa)
           
  0.485
102596484
Uncharacterized protein; HB1 (252 aa)
           
  0.483
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (11%) [HD]