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SHKA protein (Solanum tuberosum) - STRING interaction network
"SHKA" - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic in Solanum tuberosum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKAPhospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic (541 aa)    
Predicted Functional Partners:
102598775
Uncharacterized protein; Dehydroquinate synthase (439 aa)
   
 
  0.985
102599197
Chorismate mutase 1 (320 aa)
   
 
  0.802
102589786
Chorimate mutase (254 aa)
   
 
  0.800
PGSC0003DMT400065880
Uncharacterized protein; Dehydroquinate dehydratase/shikimate dehydrogenase (217 aa)
   
   
  0.788
PGSC0003DMT400061790
Uncharacterized protein; Shikimate dehydrogenase (494 aa)
   
   
  0.738
102578356
Uncharacterized protein; 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2 (518 aa)
   
   
  0.738
PGSC0003DMT400059349
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family (197 aa)
         
  0.709
102594083
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family (197 aa)
         
  0.709
102589179
Uncharacterized protein; Shikimate kinase, chloroplastic (301 aa)
   
   
  0.700
102585983
Uncharacterized protein; Shikimate kinase (260 aa)
         
  0.700
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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