STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45601.1MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. (455 aa)    
Predicted Functional Partners:
EDR45600.1
Hypothetical protein; KEGG: sat:SYN_01231 3.6e-24 cytidylate kinase K00945; COG: NOG14451 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
     0.802
EDR45598.1
Hypothetical protein; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Psort location: Cytoplasmic, score: 8.87.
   
   0.439
EDR45597.1
O-methyltransferase domain protein; KEGG: fnu:FN0388 3.0e-36 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599; COG: COG3315 O-Methyltransferase involved in polyketide biosynthesis.
       0.437
EDR45599.1
Ketopantoate reductase PanE/ApbA; KEGG: fra:Francci3_1861 3.0e-09 2-dehydropantoate 2-reductase K00077; COG: COG1893 Ketopantoate reductase; Psort location: Cytoplasmic, score: 8.87.
       0.437
EDR46398.1
Transcriptional regulator, MarR family; COG: COG1846 Transcriptional regulators; Psort location: CytoplasmicMembrane, score: 7.80.
 
    0.424
EDR45596.1
BAAT/acyl-CoA thioester hydrolase C-terminal domain protein; KEGG: bld:BLi01024 1.4e-12 hypothetical protein K01068; COG: COG1073 Hydrolases of the alpha/beta superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.417
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.