STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45374.1Hypothetical protein; COG: COG1396 Predicted transcriptional regulators; Psort location: CytoplasmicMembrane, score: 9.99. (279 aa)    
Predicted Functional Partners:
EDR48037.1
DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.530
EDR46430.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.0062 dam; adenine-specific DNA methyltransferase K06223; COG: COG1396 Predicted transcriptional regulators; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.530
EDR45819.1
DNA-binding helix-turn-helix protein; COG: NOG23408 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.482
EDR48469.1
DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.478
EDR46767.1
DNA-binding helix-turn-helix protein; COG: NOG16841 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.459
EDR48597.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.0085 dam; adenine-specific DNA methyltransferase K06223; COG: COG2932 Predicted transcriptional regulator.
  
     0.457
EDR45375.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
       0.456
EDR45373.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.453
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.