STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45415.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
EDR45411.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.584
EDR45412.1
CHC2 zinc finger domain protein; KEGG: dde:Dde_2053 1.7e-10 DNA primase K02316; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.584
EDR45413.1
Hypothetical protein.
       0.584
EDR45414.1
Hypothetical protein; KEGG: efa:EF2312 9.1e-51 topB-2; DNA topoisomerase III K03169; COG: COG0550 Topoisomerase IA; Psort location: Cytoplasmic, score: 8.87.
       0.584
EDR45409.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.517
EDR45410.1
SNF2 family N-terminal domain protein; KEGG: chu:CHU_1468 5.2e-11 dpn; possible adenine-specific DNA methylase K00599; COG: COG4646 DNA methylase; Psort location: Extracellular, score: 7.50.
       0.517
EDR45416.1
Virulence-associated protein E; COG: COG5545 Predicted P-loop ATPase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
       0.423
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.