STRINGSTRING
BACCAP_00031 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00031" - ABC transporter, permease protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00031ABC transporter, permease protein (279 aa)    
Predicted Functional Partners:
BACCAP_00030
ABC transporter, ATP-binding protein (371 aa)
  0.994
BACCAP_00032
ABC transporter, permease protein (299 aa)
 
  0.993
BACCAP_00062
ABC transporter, ATP-binding protein (373 aa)
  0.973
BACCAP_01517
ABC transporter, permease protein (284 aa)
 
  0.957
BACCAP_01461
ABC transporter, permease protein (278 aa)
 
  0.957
BACCAP_01441
ABC transporter, permease protein (296 aa)
 
  0.957
BACCAP_01057
ABC transporter, permease protein (312 aa)
 
  0.956
BACCAP_00041
Uncharacterized protein (752 aa)
 
   
    0.903
BACCAP_00035
Uncharacterized protein (682 aa)
              0.868
BACCAP_00033
Uncharacterized protein (418 aa)
              0.867
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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