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EDN01998.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01998.1" - COG: COG0395 ABC-type sugar transport system, permease component in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01998.1COG- COG0395 ABC-type sugar transport system, permease component; Psort location- CytoplasmicMembrane, score-10.00 (279 aa)    
Predicted Functional Partners:
EDN01999.1
KEGG- ava-Ava_0243 0.0080 molybdate ABC transporter, permease protein K02018; COG- COG1175 ABC-type sugar transport systems, permease components; Psort location- CytoplasmicMembrane, score-10.00 (299 aa)
  0.995
EDN01997.1
KEGG- ret-RHE_PC00104 1.6e-85 probable sugar ABC transporter, ATP-binding protein K05816; COG- COG3839 ABC-type sugar transport systems, ATPase components; Psort location- Cytoplasmic, score-9.12 (371 aa)
  0.981
EDN02029.1
KEGG- sth-STH1782 3.2e-103 sugar ABC transportor ATP-binding protein K05816; COG- COG3839 ABC-type sugar transport systems, ATPase components; Psort location- CytoplasmicMembrane, score-9.59; Belongs to the ABC transporter superfamily (373 aa)
  0.960
EDN02002.1
Uncharacterized protein; KEGG- nma-NMA0905 5.5e-11 iga; IgA1 protease K01347; COG- COG0419 ATPase involved in DNA repair (682 aa)
 
          0.935
EDN02000.1
Uncharacterized protein; Psort location- CytoplasmicMembrane, score-9.50 (418 aa)
 
          0.917
EDN00675.1
KEGG- cya-CYA_1846 0.00077 modB; molybdate ABC transporter, permease protein K02018; COG- COG1175 ABC-type sugar transport systems, permease components; Psort location- CytoplasmicMembrane, score-10.00 (296 aa)
  0.888
EDN00751.1
KEGG- ava-Ava_0243 0.00055 molybdate ABC transporter, permease protein K02018; COG- COG1175 ABC-type sugar transport systems, permease components; Psort location- CytoplasmicMembrane, score-10.00 (284 aa)
  0.854
EDN00695.1
COG- COG1175 ABC-type sugar transport systems, permease components; Psort location- CytoplasmicMembrane, score-10.00 (278 aa)
  0.854
EDN01116.1
ABC transporter, permease protein; KEGG- baa-BA_0884 0.00065 binding-protein-dependent transport systems inner membrane component K00294; COG- COG1175 ABC-type sugar transport systems, permease components; Psort location- CytoplasmicMembrane, score-10.00 (312 aa)
  0.845
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family (375 aa)
 
  0.834
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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