STRINGSTRING
BACCAP_00033 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00033" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00033Uncharacterized protein (418 aa)    
Predicted Functional Partners:
BACCAP_00032
ABC transporter, permease protein (299 aa)
              0.867
BACCAP_00031
ABC transporter, permease protein (279 aa)
              0.867
BACCAP_00035
Uncharacterized protein (682 aa)
              0.825
BACCAP_00030
ABC transporter, ATP-binding protein (371 aa)
              0.817
BACCAP_00036
Uncharacterized protein (49 aa)
              0.748
BACCAP_00037
Transporter (470 aa)
              0.571
BACCAP_00029
FAD binding domain protein (606 aa)
              0.441
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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