STRINGSTRING
BACCAP_00041 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00041" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00041Uncharacterized protein (752 aa)    
Predicted Functional Partners:
BACCAP_00032
ABC transporter, permease protein (299 aa)
 
   
    0.910
BACCAP_00031
ABC transporter, permease protein (279 aa)
 
   
    0.903
BACCAP_00038
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (438 aa)
 
          0.840
BACCAP_00040
Response regulator receiver domain protein (248 aa)
 
          0.765
BACCAP_01518
ABC transporter, permease protein (278 aa)
 
   
    0.691
BACCAP_02555
Uncharacterized protein (167 aa)
   
          0.648
BACCAP_01056
ABC transporter, permease protein (293 aa)
       
    0.644
BACCAP_01442
ABC transporter, permease protein (276 aa)
       
    0.623
BACCAP_03365
Uncharacterized protein (227 aa)
   
          0.559
BACCAP_04346
Uncharacterized protein (77 aa)
   
          0.555
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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