STRINGSTRING
BACCAP_00046 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00046" - Polysaccharide deacetylase in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00046Polysaccharide deacetylase (253 aa)    
Predicted Functional Partners:
BACCAP_00885
Glycosyltransferase, group 2 family protein (427 aa)
   
   
  0.865
BACCAP_01611
Glycosyltransferase, group 2 family protein (324 aa)
 
 
  0.848
BACCAP_01612
Glycosyltransferase, group 2 family protein (331 aa)
 
 
  0.826
BACCAP_04794
Glycosyltransferase, group 2 family protein (294 aa)
 
 
  0.812
BACCAP_01599
Glycosyltransferase, group 2 family protein (353 aa)
 
 
  0.806
BACCAP_01617
Glycosyltransferase, group 2 family protein (331 aa)
 
 
  0.799
BACCAP_03497
Glycosyltransferase, group 2 family protein (320 aa)
   
 
  0.798
BACCAP_04286
Uncharacterized protein (351 aa)
   
 
  0.797
BACCAP_02374
Glycosyltransferase, group 2 family protein (342 aa)
   
 
  0.797
BACCAP_01616
Glycosyltransferase, group 2 family protein (295 aa)
   
 
  0.797
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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