STRINGSTRING
BACCAP_00053 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00053" - Isocitrate dehydrogenase [NADP] in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00053Isocitrate dehydrogenase [NADP] (404 aa)    
Predicted Functional Partners:
BACCAP_00900
Glutamate synthase [NADPH], large subunit (1551 aa)
   
 
  0.936
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1180 aa)
       
  0.933
BACCAP_03637
Aconitase family protein (749 aa)
   
  0.909
BACCAP_00055
Uncharacterized protein (62 aa)
              0.859
leuB
Beta-IPM dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (358 aa)
   
  0.851
BACCAP_03091
Aldehyde-alcohol dehydrogenase (883 aa)
   
 
  0.848
BACCAP_02271
Glutamate dehydrogenase (445 aa)
     
  0.839
BACCAP_03608
Aminotransferase, class I/II (397 aa)
   
 
  0.811
BACCAP_01993
Aminotransferase, class I/II (380 aa)
   
 
  0.811
purB
Adenylosuccinase (479 aa)
   
 
  0.783
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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