STRINGSTRING
BACCAP_00060 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00060" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00060Uncharacterized protein (140 aa)    
Predicted Functional Partners:
cydC
Thiol reductant ABC exporter, CydC subunit (556 aa)
 
          0.971
BACCAP_00057
Putative thiol reductant ABC exporter, CydD subunit (582 aa)
 
          0.970
BACCAP_00059
Uncharacterized protein (114 aa)
 
          0.937
BACCAP_00061
Metallo-beta-lactamase domain protein (397 aa)
              0.504
BACCAP_00056
Uncharacterized protein (262 aa)
              0.459
BACCAP_00949
Uncharacterized protein (67 aa)
   
          0.422
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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