STRINGSTRING
BACCAP_00061 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00061" - Metallo-beta-lactamase domain protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00061Metallo-beta-lactamase domain protein (397 aa)    
Predicted Functional Partners:
argG
Citrulline--aspartate ligase (430 aa)
         
  0.761
BACCAP_02397
Rubredoxin (52 aa)
 
     
  0.756
BACCAP_01096
Rubredoxin (177 aa)
 
     
  0.711
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1180 aa)
 
     
  0.707
BACCAP_04275
Uncharacterized protein (928 aa)
 
 
0.701
BACCAP_00057
Putative thiol reductant ABC exporter, CydD subunit (582 aa)
 
          0.582
BACCAP_00059
Uncharacterized protein (114 aa)
 
     
  0.565
cydC
Thiol reductant ABC exporter, CydC subunit (556 aa)
 
          0.563
BACCAP_01098
Putative superoxide reductase (128 aa)
       
  0.525
BACCAP_00060
Uncharacterized protein (140 aa)
              0.504
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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