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udp protein (Pseudoflavonifractor capillosus) - STRING interaction network
"udp" - Uridine phosphorylase in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
udpUridine phosphorylase (257 aa)    
Predicted Functional Partners:
cdd
Cytidine deaminase (134 aa)
 
 
  0.893
deoD
Purine-nucleoside phosphorylase (236 aa)
 
 
0.870
BACCAP_01316
Uncharacterized protein (312 aa)
   
 
  0.850
hpt
Hypoxanthine phosphoribosyltransferase (182 aa)
     
 
  0.848
BACCAP_00302
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II (575 aa)
 
 
  0.828
udk
Uridine monophosphokinase (205 aa)
       
  0.827
BACCAP_02744
5’-nucleotidase, C-terminal domain protein (792 aa)
 
 
  0.821
BACCAP_01409
5’-nucleotidase, C-terminal domain protein (709 aa)
 
 
  0.815
BACCAP_00558
5’-nucleotidase, C-terminal domain protein (1018 aa)
 
 
  0.814
BACCAP_01693
5’-nucleotidase, C-terminal domain protein (721 aa)
 
 
  0.812
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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