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trkA protein (Pseudoflavonifractor capillosus) - STRING interaction network
"trkA" - Potassium transporter peripheral membrane component in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkAPotassium transporter peripheral membrane component (466 aa)    
Predicted Functional Partners:
BACCAP_00068
Potassium uptake protein, TrkH family (481 aa)
 
 
  0.994
BACCAP_04662
Putative ATP synthase F0, A subunit (442 aa)
   
 
  0.803
BACCAP_04529
Potassium uptake protein, TrkH family (444 aa)
   
 
  0.803
BACCAP_00069
Transcriptional regulator, TetR family (201 aa)
              0.731
BACCAP_02214
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 (642 aa)
     
 
  0.683
BACCAP_00065
Uncharacterized protein (53 aa)
              0.552
sun
Ribosomal RNA small subunit methyltransferase B (447 aa)
   
   
  0.532
BACCAP_02215
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 (155 aa)
     
 
  0.468
fmt
Methionyl-tRNA formyltransferase ; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (311 aa)
   
   
  0.456
ispD
MEP cytidylyltransferase ; Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) (212 aa)
   
        0.445
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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