STRINGSTRING
BACCAP_00070 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00070" - FMN-binding domain protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00070FMN-binding domain protein (398 aa)    
Predicted Functional Partners:
BACCAP_02408
FAD binding domain protein (628 aa)
   
          0.735
BACCAP_02329
Flavocytochrome c (672 aa)
   
          0.732
BACCAP_01087
FAD binding domain protein (664 aa)
   
          0.683
BACCAP_04271
Uncharacterized protein (601 aa)
   
          0.649
BACCAP_01484
Uncharacterized protein (737 aa)
   
          0.509
BACCAP_00071
Uncharacterized protein (50 aa)
              0.486
BACCAP_03159
Putative peptidoglycan binding domain protein (367 aa)
   
          0.454
BACCAP_02252
Acetyltransferase, GNAT family (199 aa)
   
          0.441
BACCAP_02491
Uncharacterized protein (58 aa)
   
          0.419
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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