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STRINGSTRING
EDN02044.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN02044.1" - annotation not available in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN02044.1annotation not available (63 aa)    
Predicted Functional Partners:
EDN02045.1
Uncharacterized protein; Psort location- Cytoplasmic, score-8.96 (171 aa)
              0.845
EDN02047.1
Inosine-uridine preferring nucleoside hydrolase; KEGG- sfr-Sfri_4026 3.2e-64 purine nucleosidase K01239; COG- COG1957 Inosine-uridine nucleoside N-ribohydrolase (310 aa)
              0.826
EDN02046.1
Inosine-uridine preferring nucleoside hydrolase; KEGG- sfx-S0652 6.3e-91 ybeK; putative tRNA synthetase K01250; COG- COG1957 Inosine-uridine nucleoside N-ribohydrolase; Psort location- Cytoplasmic, score-8.96 (320 aa)
              0.826
EDN02043.1
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (550 aa)
              0.657
EDN02042.1
Phosphocarrier, HPr family; KEGG- cvi-CV0980 7.4e-10 probable phosphoenolpyruvate-protein phosphotransferase K02766-K02768-K02784; COG- COG1925 Phosphotransferase system, HPr-related proteins; Psort location- Cytoplasmic, score-9.26 (86 aa)
              0.495
EDN02041.1
PRD domain protein; KEGG- spi-MGAS10750_Spy1176 1.1e-08 transcription antiterminator, BglG family / PTS system, mannitol (cryptic)-specific IIA component K00890; COG- COG3711 Transcriptional antiterminator; Psort location- Cytoplasmic, score-8.96 (285 aa)
              0.444
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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