STRINGSTRING
BACCAP_00090 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00090" - Ethanolamine ammonia-lyase small subunit in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00090Ethanolamine ammonia-lyase small subunit (303 aa)    
Predicted Functional Partners:
BACCAP_00091
Ethanolamine ammonia-lyase, large subunit (454 aa)
  0.998
BACCAP_00092
Ethanolamine utilization protein EutA (490 aa)
 
  0.997
BACCAP_01560
Ethanolamine ammonia-lyase, large subunit (455 aa)
  0.994
BACCAP_01539
Ethanolamine ammonia-lyase, large subunit (456 aa)
  0.994
BACCAP_01538
Ethanolamine utilization protein EutA (479 aa)
 
  0.984
BACCAP_00089
BMC domain protein (217 aa)
 
   
  0.983
BACCAP_00086
Putative ATP-cob(I)alamin adenosyltransferase (244 aa)
 
   
  0.944
BACCAP_00082
Ethanolamine utilization protein, EutH (363 aa)
 
   
  0.943
BACCAP_00081
Ethanolamine utilization protein EutQ (142 aa)
 
   
  0.932
BACCAP_01558
BMC domain protein (224 aa)
 
   
  0.913
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (11%) [HD]