STRINGSTRING
BACCAP_00116 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00116" - Uncharacterized protein in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00116Uncharacterized protein (69 aa)    
Predicted Functional Partners:
BACCAP_00117
tRNA (cytidine/uridine-2’-O-)-methyltransferase ; Could methylate the ribose at the nucleotide 34 wobble position in tRNA (163 aa)
              0.665
pgk
Phosphoglycerate kinase (423 aa)
              0.665
proB
Gamma-glutamyl kinase ; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (273 aa)
              0.517
tpiA
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (257 aa)
              0.465
proA
Glutamyl-gamma-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate (414 aa)
              0.415
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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