STRINGSTRING
BACCAP_00130 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00130" - Chromate transport protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00130Chromate transport protein (198 aa)    
Predicted Functional Partners:
BACCAP_00129
Chromate transport protein (183 aa)
 
     
0.929
BACCAP_00128
Uncharacterized protein (270 aa)
              0.692
BACCAP_00127
Sigma-70 region 2 (183 aa)
              0.692
BACCAP_00126
Thrombospondin type 3 repeat protein (173 aa)
              0.692
BACCAP_01240
Chromate transport protein (193 aa)
 
     
0.550
BACCAP_00601
Chromate transport protein (190 aa)
 
       
0.549
BACCAP_00570
Mg chelatase-like protein (516 aa)
       
    0.499
nadE
NAD+ synthase (641 aa)
   
   
  0.412
BACCAP_02455
Transcriptional regulator, PadR family (183 aa)
         
  0.407
BACCAP_00274
Transcriptional regulator, PadR family (122 aa)
         
  0.407
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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