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pyrB protein (Pseudoflavonifractor capillosus) - STRING interaction network
"pyrB" - Aspartate transcarbamylase in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBAspartate transcarbamylase (354 aa)    
Predicted Functional Partners:
pyrC
Dihydroorotase (427 aa)
 
  0.999
carA
Carbamoyl-phosphate synthetase glutamine chain (363 aa)
  0.999
carB
Carbamoyl-phosphate synthetase ammonia chain (1098 aa)
  0.999
BACCAP_00721
Phosphoribosylformylglycinamidine synthase (1235 aa)
   
 
  0.998
hydA
Dihydropyrimidinase (472 aa)
 
  0.994
pyrD
Dihydroorotate dehydrogenase ; Catalyzes the conversion of dihydroorotate to orotate (340 aa)
 
 
  0.985
pyrF
OMP decarboxylase (307 aa)
 
 
  0.968
BACCAP_00940
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (513 aa)
   
   
  0.926
pyrE
Orotate phosphoribosyltransferase ; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (224 aa)
 
 
  0.910
argF
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (307 aa)
 
 
0.891
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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