STRINGSTRING
BACCAP_00180 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00180" - Chain length determinant protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00180Chain length determinant protein (493 aa)    
Predicted Functional Partners:
BACCAP_00183
PHP domain protein (253 aa)
 
   
  0.968
BACCAP_00189
Bacterial sugar transferase (228 aa)
   
  0.924
BACCAP_00181
Chain length determinant protein (495 aa)
 
       
0.900
BACCAP_00188
Glycosyltransferase, group 1 family protein (363 aa)
 
   
  0.898
BACCAP_00182
Uncharacterized protein (268 aa)
 
          0.881
BACCAP_00186
Polysaccharide biosynthesis protein (654 aa)
 
   
  0.869
BACCAP_02746
Hydrogenase, Fe-only (584 aa)
   
  0.834
BACCAP_04270
Uncharacterized protein (557 aa)
     
  0.827
BACCAP_02753
4Fe-4S binding domain protein (447 aa)
     
  0.827
BACCAP_01200
4Fe-4S binding domain protein (507 aa)
     
  0.827
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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