STRINGSTRING
BACCAP_00188 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00188" - Glycosyltransferase, group 1 family protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00188Glycosyltransferase, group 1 family protein (363 aa)    
Predicted Functional Partners:
BACCAP_00189
Bacterial sugar transferase (228 aa)
          0.989
BACCAP_00191
Uncharacterized protein (413 aa)
 
          0.925
BACCAP_00187
Uncharacterized protein (371 aa)
 
          0.899
BACCAP_00180
Chain length determinant protein (493 aa)
 
   
  0.898
BACCAP_00186
Polysaccharide biosynthesis protein (654 aa)
 
   
  0.891
BACCAP_00190
Uncharacterized protein (157 aa)
 
          0.877
BACCAP_00181
Chain length determinant protein (495 aa)
 
   
  0.869
BACCAP_01615
Glycosyltransferase, group 1 family protein (371 aa)
 
   
  0.856
BACCAP_00195
Uncharacterized protein (281 aa)
 
          0.830
BACCAP_00193
Uncharacterized protein (86 aa)
 
          0.830
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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