STRINGSTRING
BACCAP_00248 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00248" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00248Uncharacterized protein (430 aa)    
Predicted Functional Partners:
BACCAP_00158
Toxic anion resistance protein TelA (402 aa)
 
          0.859
BACCAP_00249
Uncharacterized protein (52 aa)
              0.611
BACCAP_01736
Uncharacterized protein (167 aa)
   
 
      0.601
BACCAP_01966
Kinase domain protein (712 aa)
       
      0.549
BACCAP_03910
Cadmium-exporting ATPase (616 aa)
       
      0.487
BACCAP_01729
Cadmium-exporting ATPase (666 aa)
       
      0.487
BACCAP_00888
Copper-exporting ATPase (860 aa)
       
      0.487
BACCAP_00250
VanW-like protein (637 aa)
              0.451
BACCAP_04803
Heavy metal translocating P-type ATPase (704 aa)
       
      0.443
BACCAP_01265
Heavy metal translocating P-type ATPase (730 aa)
       
      0.443
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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