STRINGSTRING
EDN01942.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01942.1" - COG: COG4379 Mu-like prophage tail protein gpP in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01942.1COG- COG4379 Mu-like prophage tail protein gpP; Psort location- Cytoplasmic, score-8.96 (316 aa)    
Predicted Functional Partners:
EDN01943.1
LysM domain protein; KEGG- oih-OB0220 4.1e-06 N-acetylmuramoyl-L-alanine amidase (autolysine) K01448; COG- COG3409 Putative peptidoglycan-binding domain-containing protein (194 aa)
              0.905
EDN01947.1
annotation not available (129 aa)
              0.861
EDN01946.1
Uncharacterized protein; Psort location- Cytoplasmic, score-8.96 (143 aa)
              0.847
EDN01945.1
Uncharacterized protein; Psort location- Cytoplasmic, score-8.96 (69 aa)
              0.847
EDN01944.1
annotation not available (170 aa)
              0.845
EDN01948.1
Uncharacterized protein; COG- COG4386 Mu-like prophage tail sheath protein gpL (340 aa)
              0.836
EDN01949.1
Uncharacterized protein; KEGG- syc-syc0527_c 0.0098 4-alpha-glucanotransferase K00705; Psort location- Cytoplasmic, score-8.96 (166 aa)
              0.817
EDN01951.1
Uncharacterized protein; Psort location- Cytoplasmic, score-8.96 (121 aa)
              0.804
EDN01950.1
annotation not available (109 aa)
              0.802
EDN01939.1
Baseplate J-like protein; COG- COG3299 Uncharacterized homolog of phage Mu protein gp47; Psort location- Cytoplasmic, score-8.96 (352 aa)
              0.716
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (13%) [HD]