STRINGSTRING
BACCAP_00296 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00296" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00296Uncharacterized protein (343 aa)    
Predicted Functional Partners:
BACCAP_00298
Uncharacterized protein (313 aa)
              0.736
BACCAP_00297
Uncharacterized protein (112 aa)
              0.680
BACCAP_00295
Uncharacterized protein (121 aa)
              0.665
BACCAP_00299
Uncharacterized protein (389 aa)
              0.662
BACCAP_00294
Uncharacterized protein (109 aa)
              0.662
BACCAP_00292
Uncharacterized protein (340 aa)
              0.655
BACCAP_00293
Uncharacterized protein (166 aa)
              0.646
BACCAP_00291
Uncharacterized protein (129 aa)
              0.625
BACCAP_00286
Uncharacterized protein (316 aa)
              0.622
BACCAP_00290
Uncharacterized protein (143 aa)
              0.612
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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