STRINGSTRING
BACCAP_00349 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00349" - Alpha amylase, catalytic domain protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00349Alpha amylase, catalytic domain protein (437 aa)    
Predicted Functional Partners:
treP
PTS system trehalose-specific IIBC component ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (643 aa)
 
 
  0.967
BACCAP_00073
PTS system, glucose-like IIB component ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (711 aa)
   
 
  0.937
glgP
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (819 aa)
 
  0.911
BACCAP_00624
Uncharacterized protein (72 aa)
            0.880
BACCAP_04107
Starch [bacterial glycogen] synthase ; Synthesizes alpha-1,4-glucan chains using ADP-glucose (643 aa)
 
  0.864
BACCAP_02800
Starch [bacterial glycogen] synthase ; Synthesizes alpha-1,4-glucan chains using ADP-glucose (478 aa)
   
  0.844
malQ
Disproportionating enzyme (481 aa)
 
  0.843
glgB
Glycogen branching enzyme ; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (666 aa)
 
 
  0.837
glgD
Glucose-1-phosphate adenylyltransferase, GlgD subunit (372 aa)
 
 
  0.821
tadA
tRNA-specific adenosine deaminase ; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (256 aa)
     
  0.819
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (3%) [HD]