STRINGSTRING
BACCAP_00350 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00350" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00350Uncharacterized protein (520 aa)    
Predicted Functional Partners:
BACCAP_01622
Copper amine oxidase domain protein (546 aa)
   
          0.769
yqeC
Putative selenium-dependent hydroxylase accessory protein YqeC (262 aa)
              0.759
BACCAP_00352
Selenium-dependent molybdenum hydroxylase system protein, YqeB family (286 aa)
              0.759
BACCAP_00351
Putative xanthine dehydrogenase accessory factor (251 aa)
              0.759
BACCAP_00279
Uncharacterized protein (165 aa)
   
          0.755
BACCAP_01077
Uncharacterized protein (439 aa)
 
          0.750
BACCAP_01703
Uncharacterized protein (1479 aa)
   
          0.745
BACCAP_04458
Uncharacterized protein (861 aa)
   
          0.744
BACCAP_03238
Uncharacterized protein (469 aa)
   
          0.740
sap
S-layer protein Sap (782 aa)
   
          0.736
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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