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BACCAP_00360 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00360" - Basic membrane protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00360Basic membrane protein (402 aa)    
Predicted Functional Partners:
BACCAP_00363
Branched-chain amino acid ABC transporter, permease protein (369 aa)
 
 
  0.952
BACCAP_00364
Branched-chain amino acid ABC transporter, permease protein (327 aa)
 
 
  0.952
BACCAP_00362
ABC transporter, ATP-binding protein (526 aa)
 
 
  0.947
BACCAP_01486
Branched-chain amino acid ABC transporter, permease protein (360 aa)
 
 
  0.940
BACCAP_01485
Branched-chain amino acid ABC transporter, permease protein (305 aa)
 
 
  0.939
BACCAP_03652
Branched-chain amino acid ABC transporter, permease protein (384 aa)
 
 
  0.894
BACCAP_03651
Branched-chain amino acid ABC transporter, permease protein (313 aa)
 
 
  0.885
BACCAP_01487
ABC transporter, ATP-binding protein (503 aa)
 
 
  0.859
BACCAP_03653
ABC transporter, ATP-binding protein (501 aa)
 
 
  0.842
BACCAP_00359
Uncharacterized protein (55 aa)
              0.819
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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