STRINGSTRING
BACCAP_00372 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00372" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00372Uncharacterized protein (294 aa)    
Predicted Functional Partners:
BACCAP_00371
Butyryl-CoA-acetate CoA-transferase (449 aa)
              0.703
BACCAP_00374
Uncharacterized protein (545 aa)
              0.682
BACCAP_00373
Acetyltransferase, GNAT family (158 aa)
              0.681
BACCAP_00376
Uncharacterized protein (74 aa)
              0.637
BACCAP_00370
Uncharacterized protein (48 aa)
              0.554
BACCAP_00375
ParB-like protein (269 aa)
              0.503
BACCAP_00687
Glycerol-3-phosphate responsive antiterminator (189 aa)
   
          0.419
csaB
Polysaccharide pyruvyl transferase CsaB (743 aa)
              0.412
BACCAP_00871
Glycosyltransferase, WecB/TagA/CpsF family (240 aa)
         
  0.405
BACCAP_04824
Transketolase, thiamine diphosphate binding domain protein (304 aa)
              0.404
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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