STRINGSTRING
minD protein (Pseudoflavonifractor capillosus) - STRING interaction network
"minD" - Site-determining protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minDSite-determining protein (251 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (379 aa)
   
 
  0.928
BACCAP_00378
CobQ/CobB/MinD/ParA nucleotide binding domain protein (253 aa)
 
 
 
  0.813
BACCAP_00387
Methylglyoxal synthase (138 aa)
              0.758
BACCAP_03528
Cell shape determining protein, MreB/Mrl family (358 aa)
     
 
  0.745
BACCAP_01212
Uncharacterized protein (224 aa)
 
 
 
  0.725
mreC
Cell shape protein MreC ; Involved in formation and maintenance of cell shape (284 aa)
         
  0.656
BACCAP_00386
Uncharacterized protein (209 aa)
              0.651
BACCAP_00379
ParB-like protein (297 aa)
     
 
  0.634
gidB
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (238 aa)
              0.629
BACCAP_00383
Uncharacterized protein (122 aa)
              0.623
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (8%) [HD]