STRINGSTRING
BACCAP_00388 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00388" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00388Uncharacterized protein (85 aa)    
Predicted Functional Partners:
BACCAP_00387
Methylglyoxal synthase (138 aa)
              0.745
BACCAP_00386
Uncharacterized protein (209 aa)
              0.703
minD
Site-determining protein (251 aa)
              0.540
BACCAP_00389
Uncharacterized protein (47 aa)
              0.463
gidB
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (238 aa)
              0.407
BACCAP_00383
Uncharacterized protein (122 aa)
              0.407
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (7%) [HD]