STRINGSTRING
BACCAP_00397 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00397" - Uncharacterized protein in Pseudoflavonifractor capillosus
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00397Uncharacterized protein (107 aa)    
Predicted Functional Partners:
BACCAP_00398
Putative DNA polymerase III, delta’ subunit (331 aa)
              0.882
BACCAP_00399
PSP1 C-terminal domain protein (482 aa)
         
  0.859
BACCAP_00395
Orn/Lys/Arg decarboxylase, major domain protein (444 aa)
         
  0.804
BACCAP_00396
Uncharacterized protein (100 aa)
              0.531
mraZ
Transcriptional regulator MraZ (140 aa)
   
          0.460
BACCAP_01976
Orn/Lys/Arg decarboxylase, major domain protein (489 aa)
         
  0.420
BACCAP_01046
Methyltransferase domain protein (215 aa)
         
  0.407
BACCAP_01713
Nucleoid-associated protein BACCAP_01713 ; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (114 aa)
         
  0.407
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (277 aa)
         
  0.405
BACCAP_04865
Acyl-ACP thioesterase (265 aa)
              0.404
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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