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BACCAP_00398 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00398" - Putative DNA polymerase III, delta' subunit in Pseudoflavonifractor capillosus
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BACCAP_00398Putative DNA polymerase III, delta’ subunit (331 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (370 aa)
   
  0.993
dnaX
DNA polymerase III, subunit gamma and tau (596 aa)
 
0.986
BACCAP_03522
DNA-directed DNA polymerase (1161 aa)
 
  0.985
holA
DNA polymerase III, delta subunit (347 aa)
   
  0.980
polA
DNA polymerase (889 aa)
   
  0.976
BACCAP_03200
DNA polymerase III subunit gamma and tau family protein (381 aa)
 
  0.973
BACCAP_00397
Uncharacterized protein (107 aa)
              0.882
BACCAP_00399
PSP1 C-terminal domain protein (482 aa)
         
  0.860
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (774 aa)
   
  0.851
BACCAP_03594
DNA topoisomerase (733 aa)
   
  0.851
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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