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BACCAP_00473 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00473" - Pseudouridine synthase in Pseudoflavonifractor capillosus
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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BACCAP_00473Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (304 aa)    
Predicted Functional Partners:
lspA
Signal peptidase II ; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (166 aa)
 
   
  0.935
BACCAP_01937
Pseudouridine synthase (246 aa)
 
  0.867
BACCAP_03469
Pseudouridine synthase (238 aa)
 
  0.843
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (165 aa)
       
  0.780
BACCAP_03264
Putative ribokinase (305 aa)
 
 
  0.715
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (290 aa)
 
 
  0.713
BACCAP_02119
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (321 aa)
 
 
0.713
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (289 aa)
 
   
  0.687
truA
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (249 aa)
 
   
  0.668
BACCAP_00224
HTH domain protein (359 aa)
   
 
  0.661
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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