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EDN01820.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01820.1" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01820.1Uncharacterized protein; KEGG- mtu-Rv0113 2.8e-06 gmhA; phosphoheptose isomerase K03271; COG- COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain (244 aa)    
Predicted Functional Partners:
EDN01819.1
KEGG- sme-SMb21463 1.2e-82 putative glycosyl hydrolase, probable 6-phospho-beta-glucosidases protein K01222; COG- COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; Psort location- Cytoplasmic, score-8.96 (456 aa)
 
          0.890
EDN01821.1
Bacterial transferase hexapeptide repeat protein; KEGG- det-DET0529 5.5e-28 glucose-1-phosphate thymidylyltransferase K00973; COG- COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); Psort location- Cytoplasmic, score-8.96 (455 aa)
 
          0.889
EDN01822.1
KEGG- ava-Ava_2007 3.9e-27 ATPase, BadF/BadG/BcrA/BcrD type K00884; COG- COG2971 Predicted N-acetylglucosamine kinase; Psort location- Cytoplasmic, score-8.96 (301 aa)
 
          0.887
EDN01818.1
Kinase, PfkB family; KEGG- sme-SMb21462 1.2e-18 putative sugar kinase protein K00924; COG- COG0524 Sugar kinases, ribokinase family; Psort location- Cytoplasmic, score-8.96 (308 aa)
 
          0.838
EDN01817.1
COG- COG0477 Permeases of the major facilitator superfamily; Psort location- CytoplasmicMembrane, score-10.00 (393 aa)
              0.783
EDN01816.1
Uncharacterized protein; COG- NOG22224 non supervised orthologous group (79 aa)
              0.783
EDN01815.1
annotation not available (44 aa)
              0.783
EDN01823.1
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (572 aa)
              0.777
EDN01824.1
PRD domain protein; KEGG- spz-M5005_Spy_1083 2.4e-12 PTS system, mannitol (cryptic)-specific IIA component K03491; COG- COG3711 Transcriptional antiterminator; Psort location- Cytoplasmic, score-8.96 (657 aa)
 
          0.625
EDM98902.1
Family 4 glycosyl hydrolase; KEGG- vpa-VP2634 3.9e-130 6-phospho-beta-glucosidase K01222; COG- COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases (440 aa)
   
          0.455
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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