STRINGSTRING
BACCAP_00503 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00503" - Dipeptidyl-peptidase 6 in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00503Dipeptidyl-peptidase 6 (271 aa)    
Predicted Functional Partners:
BACCAP_04590
NlpC/P60 family protein (378 aa)
   
          0.736
BACCAP_03634
N-acetylmuramoyl-L-alanine amidase (493 aa)
       
  0.657
BACCAP_01984
N-acetylmuramoyl-L-alanine amidase (309 aa)
       
  0.657
BACCAP_04331
Uncharacterized protein (555 aa)
   
          0.649
BACCAP_00505
Uncharacterized protein (338 aa)
              0.646
BACCAP_00504
Uncharacterized protein (63 aa)
              0.646
BACCAP_01694
Beta-N-acetylhexosaminidase (435 aa)
 
   
  0.642
murC
UDP-N-acetylmuramoyl-L-alanine synthetase ; Cell wall formation (491 aa)
       
  0.638
BACCAP_04853
Glycosyl hydrolase family 3 N-terminal domain protein (722 aa)
       
  0.585
BACCAP_04852
Glycosyl hydrolase family 3 C-terminal domain protein (389 aa)
       
  0.585
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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