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cinA protein (Pseudoflavonifractor capillosus) - STRING interaction network
"cinA" - Putative competence-damage inducible protein in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cinAPutative competence-damage inducible protein (420 aa)    
Predicted Functional Partners:
BACCAP_04640
Hydrolase, HD family (389 aa)
 
   
  0.893
pncB
Nicotinate phosphoribosyltransferase ; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (483 aa)
   
 
  0.848
BACCAP_00741
HAD hydrolase, TIGR02254 family (232 aa)
       
    0.833
BACCAP_00558
5’-nucleotidase, C-terminal domain protein (1018 aa)
       
  0.830
BACCAP_04655
DNA-binding helix-turn-helix protein (79 aa)
       
  0.765
BACCAP_04149
DNA-binding helix-turn-helix protein (259 aa)
       
  0.765
BACCAP_03683
DNA-binding helix-turn-helix protein (171 aa)
       
  0.765
BACCAP_02432
DNA-binding helix-turn-helix protein (210 aa)
       
  0.765
BACCAP_00587
DNA-binding helix-turn-helix protein (155 aa)
       
  0.765
BACCAP_00524
DNA-binding helix-turn-helix protein (110 aa)
       
  0.765
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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