STRINGSTRING
BACCAP_00577 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00577" - ABC transporter, ATP-binding protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00577ABC transporter, ATP-binding protein (265 aa)    
Predicted Functional Partners:
BACCAP_00578
Branched-chain amino acid ABC transporter, permease protein (361 aa)
 
  0.997
BACCAP_00579
Branched-chain amino acid ABC transporter, permease protein (305 aa)
 
  0.992
BACCAP_00576
ABC transporter, ATP-binding protein (239 aa)
 
 
0.991
BACCAP_00581
Receptor family ligand-binding protein (401 aa)
 
 
  0.971
BACCAP_00575
Uncharacterized protein (66 aa)
              0.669
BACCAP_01382
Uncharacterized protein (182 aa)
     
  0.648
BACCAP_00233
ABC transporter, permease protein (255 aa)
 
     
  0.623
BACCAP_01384
Uncharacterized protein (298 aa)
       
  0.589
BACCAP_00235
ABC transporter, substrate-binding protein, family 3 (288 aa)
     
  0.589
BACCAP_00574
DNA-binding helix-turn-helix protein (74 aa)
              0.575
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (9%) [HD]