STRINGSTRING
BACCAP_00583 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00583" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00583Uncharacterized protein (280 aa)    
Predicted Functional Partners:
BACCAP_00582
Oxidoreductase, short chain dehydrogenase/reductase family protein (245 aa)
              0.833
BACCAP_01269
Cyclic nucleotide-binding domain protein (224 aa)
 
   
  0.694
BACCAP_04780
AMP-binding enzyme (545 aa)
   
 
  0.692
BACCAP_04774
Aminotransferase, class I/II (388 aa)
   
 
  0.664
BACCAP_03608
Aminotransferase, class I/II (397 aa)
   
 
  0.664
dapL
LL-diaminopimelate aminotransferase ; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli (407 aa)
   
 
  0.664
BACCAP_01993
Aminotransferase, class I/II (380 aa)
   
 
  0.664
nadE
NAD+ synthase (641 aa)
   
 
  0.655
BACCAP_00584
Uncharacterized protein (50 aa)
              0.655
BACCAP_01595
Sugar isomerase, KpsF/GutQ family (324 aa)
       
  0.653
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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