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BACCAP_00589 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00589" - Site-specific recombinase, phage integrase family in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00589Site-specific recombinase, phage integrase family (301 aa)    
Predicted Functional Partners:
BACCAP_00588
Uncharacterized protein (309 aa)
              0.859
BACCAP_00590
Uncharacterized protein (196 aa)
              0.856
BACCAP_02604
Phage integrase SAM-like domain protein (285 aa)
 
 
 
  0.818
BACCAP_01072
Phage integrase SAM-like domain protein (349 aa)
   
          0.776
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (774 aa)
 
   
  0.731
BACCAP_03594
DNA topoisomerase (733 aa)
   
   
  0.683
BACCAP_03974
Uncharacterized protein (305 aa)
   
   
  0.525
BACCAP_02997
Uncharacterized protein (174 aa)
   
   
  0.525
BACCAP_02995
Uncharacterized protein (376 aa)
   
   
  0.525
BACCAP_00983
Type I restriction modification DNA specificity domain protein (428 aa)
   
   
  0.525
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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