STRINGSTRING
BACCAP_00596 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00596" - Uncharacterized protein in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00596Uncharacterized protein (74 aa)    
Predicted Functional Partners:
BACCAP_00598
HAD hydrolase, family IA, variant 1 (213 aa)
              0.666
BACCAP_00597
Response regulator receiver domain protein (274 aa)
              0.665
BACCAP_00595
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (428 aa)
              0.665
BACCAP_00594
Uncharacterized protein (38 aa)
              0.547
BACCAP_00593
Glycosyl hydrolase family 3 N-terminal domain protein (973 aa)
              0.547
BACCAP_00592
Uncharacterized protein (121 aa)
              0.547
BACCAP_00591
Putative esterase (432 aa)
              0.547
prfC
Peptide chain release factor 3 ; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP (534 aa)
              0.540
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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