STRINGSTRING
BACCAP_00597 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00597" - Response regulator receiver domain protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00597Response regulator receiver domain protein (274 aa)    
Predicted Functional Partners:
BACCAP_00595
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (428 aa)
 
 
  0.992
BACCAP_03599
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (431 aa)
 
 
  0.950
BACCAP_04267
Uncharacterized protein (425 aa)
 
 
  0.949
BACCAP_04851
Uncharacterized protein (426 aa)
 
 
  0.949
BACCAP_03721
Putative sensor histidine kinase VirS (463 aa)
 
 
  0.949
BACCAP_03495
Uncharacterized protein (456 aa)
 
 
  0.949
BACCAP_04664
Putative sensor histidine kinase VirS (437 aa)
 
 
  0.948
BACCAP_04277
Putative sensor histidine kinase VirS (444 aa)
 
 
  0.948
BACCAP_03104
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (447 aa)
 
 
  0.944
BACCAP_00730
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (173 aa)
 
   
  0.913
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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